STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6GDM3Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
A0A1D6MVK6
Outer membrane OMP85 family protein.
   
 0.744
C0HFZ5_MAIZE
Outer membrane OMP85 family protein.
   
 0.744
K7TLK6_MAIZE
Outer membrane OMP85 family protein.
   
 0.744
TIDP3511
Outer membrane OMP85 family protein.
   
 0.744
B4FKQ4_MAIZE
Bac_surface_Ag domain-containing protein.
   
 0.703
A0A1D6NUF5
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 0.659
Pco115388
Chaperone protein dnaJ 13.
    
 0.633
A0A1D6DX29
Formation of crista junctions protein 1.
     
 0.574
C0PGL4_MAIZE
Formation of crista junctions protein 1; Belongs to the MICOS complex subunit Mic60 family.
     
 0.574
A0A1D6GF76
Cytochrome b-c1 complex subunit 7.
   
  
 0.553
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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