STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6GEX2Triacylglycerol lipase SDP1. (238 aa)    
Predicted Functional Partners:
A0A1D6K2Y9
Putative dnaJ chaperone family protein.
 
      0.821
K7VKP7_MAIZE
Isopentenyl transferase3.
     
 0.677
A0A1D6MBU9
Isopentenyl transferase8.
     
 0.676
A0A1D6NF83
Isopentenyl transferase3B.
     
 0.676
Gtc102
FACT complex subunit SPT16.
      
 0.660
A0A1D6GIP8
Adenylyl cyclase-associated protein; Belongs to the CAP family.
      
 0.560
A0A1D6KNK7
Adenylyl cyclase-associated protein; Belongs to the CAP family.
      
 0.551
A0A1D6L2Q1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
      
 0.551
SPT16
FACT complex subunit SPT16; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
      
 0.551
B6TBW4_MAIZE
Proliferation-associated protein 2G4.
     
 0.451
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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