STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6GLZ3SMAD/FHA domain-containing protein. (458 aa)    
Predicted Functional Partners:
Cl35724_1
Chaperone DnaJ-domain superfamily protein.
   
 
 0.704
Pco133413
Splicing factor CC1-like.
    
 0.588
A0A1D6GP79
Pre-mRNA-processing protein 40C.
   
 
  0.546
A0A1D6NAN3
Branched-chain-amino-acid aminotransferase 5 chloroplastic.
   
 
  0.546
A0A1D6KPZ4
Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein.
   
 
  0.545
A0A1D6Q122
Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein.
   
 
  0.545
A0A1D6MPT6
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 
 0.534
A0A1D6L6Q8
Inhibitor-3.
      
 0.516
A0A1D6GEV1
Peptidyl-prolyl cis-trans isomerase.
   
 0.514
A0A1D6H0Q8
Splicing factor 3B subunit 1.
   
 
 0.504
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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