STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6GPS1Histone deacetylase 19. (97 aa)    
Predicted Functional Partners:
A0A1D6H4M0
Chromatin modification-related protein EAF3.
    
 0.902
Hda110
Histone deacetylase.
    
 0.901
A0A1D6H7X1
High mobility group B protein 15.
   
 0.892
C0P8W9_MAIZE
High mobility group B protein 15.
   
 0.892
Umc1614
Chromatin structure-remodeling complex protein SYD.
    
 0.838
A0A1D6MXX1
UBP-type domain-containing protein.
      
 0.833
A0A1D6EF10
Leunig-related6.
   
 0.802
A0A1D6J4G2
WD-40 repeat family protein.
   
 0.802
A0A1D6KXY4
Uncharacterized protein.
   
 0.802
B4G110_MAIZE
LisH domain-containing protein.
   
 0.802
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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