STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6GQZ9RING/U-box superfamily protein. (655 aa)    
Predicted Functional Partners:
A0A1D6MFT1
Translation elongation factor EF1B/ribosomal protein S6 family protein.
  
  
 0.667
atpF
ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
  
 0.664
A0A1D6H6Y0
Putative elongation factor 1-gamma 2.
   
 
 0.615
A0A1D6LSP2
Elongation factor gamma1.
   
 
 0.615
A0A1D6QQD4
Putative elongation factor 1-gamma 2.
   
 
 0.615
B6T7G7_MAIZE
Elongation factor 1-gamma 3.
   
 
 0.615
A0A1D6ISX4
Elongation factor P.
   
  
 0.614
A0A1D6L8D5
Elongation factor P.
   
  
 0.614
A0A1Q0ZHZ7
Eukaryotic translation initiation factor 5A-1.
   
  
 0.614
B4FDE1_MAIZE
Eukaryotic translation initiation factor 5A.
   
  
 0.614
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.