STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6GRJ8RNA-binding (RRM/RBD/RNP motifs) family protein. (701 aa)    
Predicted Functional Partners:
C0PLI2_MAIZE
Cold shock protein 2.
    
 0.654
A0A1D6K2V6
Nuclear cap-binding protein subunit 1.
   
  0.526
A0A1D6ELK2
DNA-directed RNA polymerases II IV and V subunit 3.
    
  0.514
A0A1D6IKD5
E3 ubiquitin-protein ligase RKP.
   
 0.486
Gpm911
Nuclear cap-binding protein subunit 2.
    
  0.483
C0PIA2_MAIZE
Nuclear cap-binding protein subunit 2.
    
  0.483
Pco106809
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 0.431
A0A1D6G6H0
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 0.431
C0HH01_MAIZE
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 0.431
C4JA00_MAIZE
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 0.431
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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