STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIDP3607Acetyl-CoA carboxylase 1. (2269 aa)    
Predicted Functional Partners:
A0A1D6H1E9
Biotin--protein ligase 1 chloroplastic.
  
 0.875
B6SKB7_MAIZE
Methylcrotonoyl-CoA carboxylase subunit alpha.
 
 
0.834
Cl345_1a
Retrovirus-related Pol polyprotein LINE-1.
     
 0.811
A0A1D6MPT8
Methylcrotonoyl-CoA carboxylase subunit alpha mitochondrial.
 
 
0.774
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 
  0.759
Pco146226a
Long chain acyl-CoA synthetase 2.
   
  
 0.751
A0A1D6NWT6
Putative acyl-activating enzyme 19.
     
 0.746
A0A096RZN2
Carbonic anhydrase1.
  
 
 0.730
A0A1D6ERK0
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.730
A0A1D6NHQ1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.730
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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