STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6GW46F-box/kelch-repeat protein SKIP25. (399 aa)    
Predicted Functional Partners:
B4FHV3_MAIZE
Sigma factor sigB regulation protein rsbQ.
      
 0.512
C0PEF2_MAIZE
Putative esterase KAI2.
      
 0.512
A0A1D6LZZ6
Alpha/beta-Hydrolases superfamily protein.
      
 0.503
A0A1D6GW91
B-box zinc finger protein 20.
      
 0.499
B4FMW2_MAIZE
B-box zinc finger protein 20.
      
 0.499
A0A1D6LL92
F-box protein MAX2.
      
 0.459
K7V6U2_MAIZE
F-box protein MAX2.
      
 0.459
A0A1D6IAQ7
F-box/kelch-repeat protein.
      
 0.424
Si707062c10
Sigma factor sigB regulation protein rsbQ.
      
 0.424
K7VKR9_MAIZE
Strigolactone esterase D14.
      
 0.424
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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