STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6H198Protein SRG1. (496 aa)    
Predicted Functional Partners:
C0P521_MAIZE
DNA polymerase delta small subunit.
    
 0.746
A0A1D6H288
Putative small nuclear ribonucleoprotein F.
    
  0.607
A0A1D6N1J1
Crossover junction endonuclease MUS81.
    
 0.568
A0A1D6N1J5
Crossover junction endonuclease MUS81.
    
 0.568
IDP1453
Small nuclear ribonucleoprotein Sm D2.
    
 0.555
B4FFH9_MAIZE
Small nuclear ribonucleoprotein Sm D2.
    
 0.555
Umc1106
NADH-ubiquinone oxidoreductase B18 subunit4.
   
   0.540
A0A1D6JLG7
NADH ubiquinone oxidoreductase B14 subunit5.
   
   0.530
Si945024a11
Serine/threonine-protein kinase ATG1t.
   
 0.527
A0A1D6MEH7
Notchless-like protein isoform 1.
    
 
 0.526
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.