STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6H1E5Uncharacterized protein. (103 aa)    
Predicted Functional Partners:
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.546
A0A1D6JMR7
60S ribosomal protein L5-1.
   
   0.499
B4F9R4_MAIZE
60S ribosomal protein L8-3.
   
 
 0.494
B6TGT0_MAIZE
60S ribosomal protein L8-3.
   
 
 0.494
rps7-A
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
   
 
 0.440
rps7-ct
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.440
rps12-A
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
   
 
 0.438
A0A1D6FJA8
60S ribosomal protein L28-1.
   
   0.408
Pco068622
60S ribosomal protein L28-1.
   
   0.408
rpl16
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.404
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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