STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6H712NOL1R; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (498 aa)    
Predicted Functional Partners:
A0A1D6MSU7
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.907
B4FKM9_MAIZE
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
  
 
 0.905
A0A1D6Q0W5
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 
 0.893
B4G129_MAIZE
Peter Pan-like protein.
   
   0.888
Pco129446
Methionyl-tRNA formyltransferase.
  
  
 0.880
C0P4M1_MAIZE
Putative rRNA-processing protein EBP2-like protein.
   
 
 0.878
C4JC78_MAIZE
Putative rRNA-processing protein EBP2-like protein.
   
 
 0.878
Pco078642
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.865
A0A1D6IKY1
Putative ribosome biogenesis protein RLP24.
   
 
 0.857
C4J2Q3_MAIZE
Binding.
   
 
 0.857
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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