STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6HCR5LETM1-like protein. (760 aa)    
Predicted Functional Partners:
A0A1D6KP30
Myb domain protein 105.
      
 0.890
A0A1D6JMR7
60S ribosomal protein L5-1.
    
   0.588
Gl15
Floral homeotic protein APETALA 2.
      
 0.504
B4F9R4_MAIZE
60S ribosomal protein L8-3.
    
 
 0.495
B6TGT0_MAIZE
60S ribosomal protein L8-3.
    
 
 0.495
SECY
Preprotein translocase subunit SECY, chloroplastic; The central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug (By similarity).
    
 
 0.472
A0A1D6L548
60S ribosomal protein L13a-1.
   
   0.459
C0HFM4_MAIZE
60S ribosomal protein L13a-1.
   
   0.459
A0A1D6E6T5
40S ribosomal protein S11-1; Belongs to the universal ribosomal protein uS17 family.
    
   0.456
A0A1D6EAY0
60S ribosomal protein L3-1; Belongs to the universal ribosomal protein uL3 family.
    
   0.456
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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