STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6HSL7Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (874 aa)    
Predicted Functional Partners:
A0A1D6IKD5
E3 ubiquitin-protein ligase RKP.
   
 0.751
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
    
 
 0.719
Pco148683
50S ribosomal protein L4.
   
 
 0.713
A0A1D6GTP1
50S ribosomal protein L24 chloroplastic; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.697
A0A1D6ILX8
Ribosomal protein S5 domain 2-like superfamily protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.692
Lem1
30S ribosomal protein S9 chloroplastic; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.692
B4G1J8_MAIZE
50S ribosomal protein L3-1 chloroplastic; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.688
K7VP39_MAIZE
50S ribosomal protein L3-2; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.688
A0A1D6GXW0
Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.649
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.646
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.