STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6HVM7Cleavage and polyadenylation specificity factor (CPSF) A subunit protein. (1356 aa)    
Predicted Functional Partners:
C4J3D1_MAIZE
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 0.975
B6T4K0_MAIZE
PHD finger-like domain-containing protein 5A.
   
 0.966
A0A1D6IKW3
DExH-box ATP-dependent RNA helicase DExH12.
   
 
 0.962
A0A1D6PZK1
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.961
K7TV72_MAIZE
Splicing factor 3B subunit 5/RDS3 complex subunit 10.
   
 0.961
A0A1D6H0Q8
Splicing factor 3B subunit 1.
   
 0.960
K7V792_MAIZE
Splicing factor 3B subunit 1.
   
 0.960
Umc1373
Proline-rich spliceosome-associated (PSP) family protein.
   
 0.958
A0A1D6LLS9
Proline-rich spliceosome-associated (PSP) family protein.
   
 0.958
B6T0W0_MAIZE
Pre-mRNA branch site p14-like protein.
    
 0.956
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.