STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6I1U8Polyadenylate-binding protein-interacting protein 9. (295 aa)    
Predicted Functional Partners:
A0A1D6H288
Putative small nuclear ribonucleoprotein F.
    
 0.504
A0A1D6QP33
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
    
 0.504
A0A1D6K2V6
Nuclear cap-binding protein subunit 1.
    
 0.499
A0A1D6I8I0
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
    
 0.475
TERT
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.448
Gpm911
Nuclear cap-binding protein subunit 2.
    
 0.441
C0PIA2_MAIZE
Nuclear cap-binding protein subunit 2.
    
 0.441
TIDP3207
Zinc finger CCCH domain-containing protein 4.
   
 
 0.432
A0A1D6P3B9
110 kDa U5 small nuclear ribonucleoprotein component CLO.
    
 
 0.428
IDP2400
FRIGIDA-like protein; Belongs to the Frigida family.
    
 
 0.416
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.