STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pco083367(678)RNA-binding (RRM/RBD/RNP motifs) family protein. (541 aa)    
Predicted Functional Partners:
A0A1D6QLN5
Cleavage stimulating factor 64.
  
 
 0.742
IDP601
Ribosomal protein L7.
  
 
 0.739
A0A1D6E8K9
RNA binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.646
A0A1D6KIM3
RNA binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.646
K7TU34_MAIZE
RNA binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.646
K7U4K0_MAIZE
RNA binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.646
A0A1D6JIW5
Transportin-1.
    
 
 0.618
C0P3E1_MAIZE
Transportin-1.
    
 
 0.618
B6SUJ3_MAIZE
Plastid-specific 30S ribosomal protein 2.
  
 
 0.557
SC26
Splicing factor, arginine/serine-rich 2.
  
 
 0.535
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.