Pco146582(106) protein (Zea mays) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

Pco146582(106)

Sphingoid long-chain bases kinase 1. (781 aa)

Predicted Functional Partners:

A0A1D6F4L0

0.623

Pco099347

0.597

A0A1D6HN01

0.597

A0A1D6HRM1

0.597

Umc1329

0.597

Pco140702

0.597

C0HGT5_MAIZE

0.597

A0A1D6J8K2

0.568

A0A1D6KSE9

0.568

B4FBP0_MAIZE

0.568

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6F4L0	A0A1D6HN01	A0A1D6F4L0	A0A1D6HN01	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit alpha.	0.999
A0A1D6F4L0	A0A1D6HRM1	A0A1D6F4L0	A0A1D6HRM1	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit epsilon.	0.999
A0A1D6F4L0	A0A1D6J8K2	A0A1D6F4L0	A0A1D6J8K2	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.998
A0A1D6F4L0	A0A1D6KSE9	A0A1D6F4L0	A0A1D6KSE9	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.998
A0A1D6F4L0	B4FBP0_MAIZE	A0A1D6F4L0	B4FBP0	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.998
A0A1D6F4L0	C0HGT5_MAIZE	A0A1D6F4L0	C0HGT5	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit delta.	0.999
A0A1D6F4L0	Pco099347	A0A1D6F4L0	A0A1D6FAH0	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit epsilon.	0.999
A0A1D6F4L0	Pco140702	A0A1D6F4L0	B6TKY3	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit alpha.	0.999
A0A1D6F4L0	Pco146582(106)	A0A1D6F4L0	A0A1D6JBA4	T-complex protein 1 subunit zeta.	Sphingoid long-chain bases kinase 1.	0.623
A0A1D6F4L0	Umc1329	A0A1D6F4L0	B4F8V9	T-complex protein 1 subunit zeta.	T-complex protein 1 subunit delta.	0.999
A0A1D6HN01	A0A1D6F4L0	A0A1D6HN01	A0A1D6F4L0	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit zeta.	0.999
A0A1D6HN01	A0A1D6HRM1	A0A1D6HN01	A0A1D6HRM1	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit epsilon.	0.997
A0A1D6HN01	A0A1D6J8K2	A0A1D6HN01	A0A1D6J8K2	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.995
A0A1D6HN01	A0A1D6KSE9	A0A1D6HN01	A0A1D6KSE9	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.995
A0A1D6HN01	B4FBP0_MAIZE	A0A1D6HN01	B4FBP0	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.995
A0A1D6HN01	C0HGT5_MAIZE	A0A1D6HN01	C0HGT5	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit delta.	0.997
A0A1D6HN01	Pco099347	A0A1D6HN01	A0A1D6FAH0	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit epsilon.	0.997
A0A1D6HN01	Pco140702	A0A1D6HN01	B6TKY3	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit alpha.	0.543
A0A1D6HN01	Pco146582(106)	A0A1D6HN01	A0A1D6JBA4	T-complex protein 1 subunit alpha.	Sphingoid long-chain bases kinase 1.	0.597
A0A1D6HN01	Umc1329	A0A1D6HN01	B4F8V9	T-complex protein 1 subunit alpha.	T-complex protein 1 subunit delta.	0.997

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Network Stats

number of nodes:

5

number of edges:

7

average node degree:

2.8

avg. local clustering coefficient:

0.8

expected number of edges:

4

PPI enrichment p-value:

0.116

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0046578

Regulation of Ras protein signal transduction

2 of 20

2.23

1.0

0.0366

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0030414

Peptidase inhibitor activity

3 of 7

2.86

3.35

1.77e-05

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:15107

Mixed, incl. Endoplasmic reticulum tubular network organization, and Glutathione S-transferase Omega/GSH

3 of 24

2.33

2.24

0.00047

CL:15108

Mixed, incl. Glutathione S-transferase Omega/GSH, and Degradation of aromatic compounds

2 of 12

2.45

1.3

0.0140

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map04712

Circadian rhythm - plant

2 of 12

2.45

1.69

0.0038

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-5674135

MAP2K and MAPK activation

2 of 11

2.49

1.2

0.0199

MAP-5675221

Negative regulation of MAPK pathway

2 of 24

2.15

0.96

0.0414

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF01161

Phosphatidylethanolamine-binding protein

2 of 4

2.93

1.72

0.0040

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036610

PEBP-like superfamily

2 of 4

2.93

1.39

0.0115

IPR035810

Phosphatidylethanolamine-binding protein, eukaryotic

2 of 4

2.93

1.39

0.0115

IPR008914

Phosphatidylethanolamine-binding protein

2 of 4

2.93

1.39

0.0115

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