STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6JJB1Cell division control protein 48 homolog C; Belongs to the AAA ATPase family. (366 aa)    
Predicted Functional Partners:
A0A1D6GFD3
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
  
 0.818
C4J2Q3_MAIZE
Binding.
   
  
 0.803
Pco063852
DEAD-box ATP-dependent RNA helicase 16.
   
 
 0.754
A0A1D6J268
MIF4G domain-containing protein / MA3 domain-containing protein.
   
    0.753
A0A1D6FFF1
DExH-box ATP-dependent RNA helicase DExH10.
   
 0.733
A0A1D6NR03
rRNA_proc-arch domain-containing protein.
   
 0.733
K7W7N9_MAIZE
DExH-box ATP-dependent RNA helicase DExH9.
   
 0.733
A0A1D6JNW9
Transducin family protein / WD-40 repeat family protein.
   
  
 0.725
A0A1D6MSU7
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  
 0.712
A0A1D6Q0W5
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 
 0.685
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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