STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6JU74Heptahelical transmembrane protein 5. (402 aa)    
Predicted Functional Partners:
Rpd3
Histone deacetylase.
    
 
 0.591
C0HF60_MAIZE
Rab5-interacting family protein.
    
 
 0.573
Hda110
Histone deacetylase.
    
 
 0.494
A0A1D6FPV7
DEAD-box ATP-dependent RNA helicase 17; Belongs to the DEAD box helicase family.
   
 
 0.493
AY107911
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.485
C0P590_MAIZE
Bacterial hemolysin-related.
     
 0.428
A0A1D6NCH6
DUF1084 domain-containing protein.
      
 0.424
B6T2N3_MAIZE
Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer.
  
  
 0.421
A0A1D6EBG5
RRM domain-containing protein.
      
 0.416
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.