A0A1D6KFY9 protein (Zea mays) - STRING interaction network

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second shell of interactors

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a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

A0A1D6KFY9

Sulfurtransferase. (436 aa)

Predicted Functional Partners:

Aprl2

0.730

Aprl1

0.730

A0A1D6NEU5

0.708

A0A1D6PZP2

0.708

Umc2551

0.708

A0A1D6ERW2

0.700

A0A1D6MRA8

0.700

A0A1D6QGN0

0.700

B4FDS2_MAIZE

0.700

B4FLP7_MAIZE

0.700

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6ERW2	A0A1D6KFY9	A0A1D6ERW2	A0A1D6KFY9	F-box domain-containing protein.	Sulfurtransferase.	0.700
A0A1D6ERW2	Aprl1	A0A1D6ERW2	A0A1D6ICL3	F-box domain-containing protein.	Adenosine 5'-phosphosulfate reductase-like1.	0.609
A0A1D6ERW2	Aprl2	A0A1D6ERW2	A0A1D6EWS4	F-box domain-containing protein.	Adenosine 5'-phosphosulfate reductase-like2.	0.609
A0A1D6KFY9	A0A1D6ERW2	A0A1D6KFY9	A0A1D6ERW2	Sulfurtransferase.	F-box domain-containing protein.	0.700
A0A1D6KFY9	A0A1D6MRA8	A0A1D6KFY9	A0A1D6MRA8	Sulfurtransferase.	Zea CEFD homolog1.	0.700
A0A1D6KFY9	A0A1D6NEU5	A0A1D6KFY9	A0A1D6NEU5	Sulfurtransferase.	Uncharacterized protein.	0.708
A0A1D6KFY9	A0A1D6PZP2	A0A1D6KFY9	A0A1D6PZP2	Sulfurtransferase.	Uncharacterized protein.	0.708
A0A1D6KFY9	A0A1D6QGN0	A0A1D6KFY9	A0A1D6QGN0	Sulfurtransferase.	Cysteine desulfurase 1 chloroplastic.	0.700
A0A1D6KFY9	Aprl1	A0A1D6KFY9	A0A1D6ICL3	Sulfurtransferase.	Adenosine 5'-phosphosulfate reductase-like1.	0.730
A0A1D6KFY9	Aprl2	A0A1D6KFY9	A0A1D6EWS4	Sulfurtransferase.	Adenosine 5'-phosphosulfate reductase-like2.	0.730
A0A1D6KFY9	B4FDS2_MAIZE	A0A1D6KFY9	B4FDS2	Sulfurtransferase.	Putative L-cysteine desulfhydrase chloroplastic.	0.700
A0A1D6KFY9	B4FLP7_MAIZE	A0A1D6KFY9	B4FLP7	Sulfurtransferase.	Cysteine desulfurase mitochondrial.	0.700
A0A1D6KFY9	Umc2551	A0A1D6KFY9	C0PD54	Sulfurtransferase.	Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.	0.708
A0A1D6MRA8	A0A1D6KFY9	A0A1D6MRA8	A0A1D6KFY9	Zea CEFD homolog1.	Sulfurtransferase.	0.700
A0A1D6MRA8	Aprl1	A0A1D6MRA8	A0A1D6ICL3	Zea CEFD homolog1.	Adenosine 5'-phosphosulfate reductase-like1.	0.609
A0A1D6MRA8	Aprl2	A0A1D6MRA8	A0A1D6EWS4	Zea CEFD homolog1.	Adenosine 5'-phosphosulfate reductase-like2.	0.609
A0A1D6MRA8	B4FDS2_MAIZE	A0A1D6MRA8	B4FDS2	Zea CEFD homolog1.	Putative L-cysteine desulfhydrase chloroplastic.	0.901
A0A1D6MRA8	B4FLP7_MAIZE	A0A1D6MRA8	B4FLP7	Zea CEFD homolog1.	Cysteine desulfurase mitochondrial.	0.532
A0A1D6NEU5	A0A1D6KFY9	A0A1D6NEU5	A0A1D6KFY9	Uncharacterized protein.	Sulfurtransferase.	0.708
A0A1D6PZP2	A0A1D6KFY9	A0A1D6PZP2	A0A1D6KFY9	Uncharacterized protein.	Sulfurtransferase.	0.708

page 1 of 3

Network Stats

number of nodes:

11

number of edges:

38

average node degree:

6.91

avg. local clustering coefficient:

0.826

expected number of edges:

12

PPI enrichment p-value:

1.85e-09

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0042274

Ribosomal small subunit biogenesis

6 of 82

2.23

4.13

2.29e-09

GO:0006412

Translation

7 of 363

1.65

2.66

4.73e-08

GO:0030490

Maturation of SSU-rRNA

4 of 67

2.14

2.6

5.68e-06

GO:0006364

rRNA processing

5 of 268

1.64

1.99

1.31e-05

GO:0000462

Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

3 of 52

2.13

1.86

0.00024

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

7 of 183

1.95

3.84

5.95e-10

GO:0030515

snoRNA binding

2 of 23

2.3

0.92

0.0206

GO:0003723

RNA binding

5 of 763

1.18

0.85

0.0053

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0022627

Cytosolic small ribosomal subunit

5 of 27

2.63

4.96

2.91e-10

GO:0015935

Small ribosomal subunit

6 of 59

2.37

4.94

8.00e-11

GO:0005840

Ribosome

7 of 202

1.91

3.83

2.91e-10

GO:1990904

Ribonucleoprotein complex

8 of 551

1.53

2.65

1.59e-09

GO:0030684

Preribosome

4 of 107

1.94

2.35

9.86e-06

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:10688

Cytosolic small ribosomal subunit, and Ribosomal protein S8

5 of 13

2.95

5.34

1.20e-10

CL:11902

Preribosome, small subunit precursor

3 of 5

3.14

3.45

5.25e-07

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03010

Ribosome

7 of 217

1.87

3.81

1.81e-10

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-6791226

Major pathway of rRNA processing in the nucleolus and cytosol

8 of 182

2.01

4.81

1.23e-12

MAP-8868773

rRNA processing in the nucleus and cytosol

8 of 185

2.0

4.79

1.23e-12

MAP-72312

rRNA processing

8 of 188

1.99

4.76

1.23e-12

MAP-72695

Formation of the ternary complex, and subsequently, the 43S complex

6 of 103

2.13

4.25

4.48e-10

MAP-72702

Ribosomal scanning and start codon recognition

6 of 124

2.05

3.96

1.10e-09

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0015935

Small ribosomal subunit

7 of 73

2.35

5.74

7.38e-13

GOCC:0022627

Cytosolic small ribosomal subunit

6 of 39

2.55

5.72

4.85e-12

GOCC:1990904

Ribonucleoprotein complex

9 of 532

1.59

3.18

1.42e-11

GOCC:0030684

Preribosome

3 of 83

1.92

1.62

0.00054

GOCC:0030688

Preribosome, small subunit precursor

2 of 14

2.52

1.5

0.0017

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0689

Ribosomal protein

7 of 107

2.18

5.19

2.26e-12

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03719

Ribosomal protein S5, C-terminal domain

2 of 2

3.37

1.62

0.0012

PF00333

Ribosomal protein S5, N-terminal domain

2 of 2

3.37

1.62

0.0012

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR013810

Ribosomal protein S5, N-terminal

2 of 2

3.37

1.39

0.0032

IPR005324

Ribosomal protein S5, C-terminal

2 of 2

3.37

1.39

0.0032

IPR000851

Ribosomal protein S5

2 of 2

3.37

1.39

0.0032

IPR014721

Ribosomal protein S5 domain 2-type fold, subgroup

2 of 19

2.39

0.85

0.0279

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