STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6KID2Leucine aminopeptidase 2 chloroplastic. (318 aa)    
Predicted Functional Partners:
A0A1D6ELK2
DNA-directed RNA polymerases II IV and V subunit 3.
  
 0.990
B6SLK8_MAIZE
DNA-directed RNA polymerase II 16 kDa polypeptide.
    
 0.969
B4FGM1_MAIZE
DNA-directed RNA polymerases II and IV subunit 5A.
  
 0.967
Pco088367b
DNA-directed RNA polymerases II 24 kDa polypeptide.
  
 0.967
Si946076e12
RNA polymerase I subunit 43.
  
 0.966
A0A1D6IU95
DNA-directed RNA polymerases II IV and V subunit 10.
   
 0.964
B4FLZ6_MAIZE
DNA-directed RNA polymerases II IV and V subunit 6A.
  
 0.963
B6SI57_MAIZE
DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide.
  
 0.963
A0A1D6GUL6
DNA-directed RNA polymerases II IV and V subunit 8B.
   
 0.949
Pco144871
DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 0.949
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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