A0A1D6L6Q4 protein (Zea mays) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1D6L6Q4

AP-1 complex subunit sigma-2. (314 aa)

Predicted Functional Partners:

A0A1D6G6A5

0.891

Pco107491b

0.891

A0A1D6J847

0.891

A0A1D6LLN3

0.891

A0A1D6N3A1

0.891

K7U510_MAIZE

0.891

K7VAA4_MAIZE

0.891

A0A1D6E563

0.884

A0A1D6LL31

0.884

B4FQ20_MAIZE

0.884

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6E563	A0A1D6G6A5	A0A1D6E563	A0A1D6G6A5	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.875
A0A1D6E563	A0A1D6J847	A0A1D6E563	A0A1D6J847	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	GAE domain-containing protein.	0.837
A0A1D6E563	A0A1D6L6Q4	A0A1D6E563	A0A1D6L6Q4	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit sigma-2.	0.884
A0A1D6E563	A0A1D6LLN3	A0A1D6E563	A0A1D6LLN3	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.837
A0A1D6E563	A0A1D6N3A1	A0A1D6E563	A0A1D6N3A1	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.873
A0A1D6E563	K7U510_MAIZE	A0A1D6E563	K7U510	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.837
A0A1D6E563	K7VAA4_MAIZE	A0A1D6E563	K7VAA4	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.837
A0A1D6E563	Pco107491b	A0A1D6E563	A0A1D6J6G0	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	AP-4 complex subunit epsilon.	0.886
A0A1D6G6A5	A0A1D6E563	A0A1D6G6A5	A0A1D6E563	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	0.875
A0A1D6G6A5	A0A1D6J847	A0A1D6G6A5	A0A1D6J847	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	GAE domain-containing protein.	0.544
A0A1D6G6A5	A0A1D6L6Q4	A0A1D6G6A5	A0A1D6L6Q4	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit sigma-2.	0.891
A0A1D6G6A5	A0A1D6LL31	A0A1D6G6A5	A0A1D6LL31	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	0.843
A0A1D6G6A5	A0A1D6LLN3	A0A1D6G6A5	A0A1D6LLN3	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit gamma.	0.544
A0A1D6G6A5	A0A1D6N3A1	A0A1D6G6A5	A0A1D6N3A1	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.543
A0A1D6G6A5	B4FQ20_MAIZE	A0A1D6G6A5	B4FQ20	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	0.843
A0A1D6G6A5	K7U510_MAIZE	A0A1D6G6A5	K7U510	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit gamma.	0.544
A0A1D6G6A5	K7VAA4_MAIZE	A0A1D6G6A5	K7VAA4	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-1 complex subunit gamma.	0.544
A0A1D6G6A5	Pco107491b	A0A1D6G6A5	A0A1D6J6G0	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	AP-4 complex subunit epsilon.	0.544
A0A1D6J847	A0A1D6E563	A0A1D6J847	A0A1D6E563	GAE domain-containing protein.	AP-4 complex subunit mu; Belongs to the adaptor complexes medium subunit family.	0.837
A0A1D6J847	A0A1D6G6A5	A0A1D6J847	A0A1D6G6A5	GAE domain-containing protein.	AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.	0.544