STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6L888Homeobox-DDT domain protein RLT3. (1178 aa)    
Predicted Functional Partners:
A0A1D6LQG9
RNA-directed DNA polymerase (Reverse transcriptase).
  
     0.527
A0A1D6KR95
Myosin heavy chain-related protein.
  
     0.524
A0A1D6GNH1
Myosin heavy chain-related protein.
  
     0.519
A0A1D6IMF4
DNA binding.
  
     0.517
A0A1D6MNT0
ARM repeat superfamily protein.
  
     0.517
A0A1D6Q894
Protein CROWDED NUCLEI 1.
  
     0.516
A0A1D6I6F7
Pentatricopeptide repeat-containing protein.
  
     0.514
A0A1D6FZN3
Glycosyl transferase family 1 protein.
  
     0.513
A0A1D6GMG7
Embryo defective 2016.
  
     0.513
B4FPA3_MAIZE
HXXXD-type acyl-transferase family protein.
  
     0.513
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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