STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6LA85Zinc finger CCCH domain-containing protein 42. (313 aa)    
Predicted Functional Partners:
A0A1D6M2D7
FHA domain-containing protein DDL.
   
 0.995
K7VPB1_MAIZE
Pre-mRNA-splicing factor of RES complex protein.
   
 0.995
B6T4K0_MAIZE
PHD finger-like domain-containing protein 5A.
    
 0.983
A0A1D6H0Q8
Splicing factor 3B subunit 1.
    
 0.971
K7V792_MAIZE
Splicing factor 3B subunit 1.
    
 0.971
Umc1373
Proline-rich spliceosome-associated (PSP) family protein.
    
 0.969
A0A1D6LLS9
Proline-rich spliceosome-associated (PSP) family protein.
    
 0.969
IDP2400
FRIGIDA-like protein; Belongs to the Frigida family.
   
 
 0.962
B4FPG3_MAIZE
Hydroxyproline-rich glycoprotein family protein.
    
 0.959
B4FY18_MAIZE
Hydroxyproline-rich glycoprotein family protein.
    
 0.959
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.