STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6LGX2E3 ubiquitin-protein ligase UPL4. (1336 aa)    
Predicted Functional Partners:
A0A1D6MLE3
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.999
A0A1D6LQF9
Ubiquitin-conjugating enzyme E2 22; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.952
A0A1D6ES07
Ubiquitin-like superfamily protein.
   
 0.916
A0A1D6G247
Ubiquitin-like superfamily protein.
   
 0.916
Pco108118f
Ubiquitin-NEDD8-like protein RUB1.
   
 0.916
A0A1D6LQK5
Ubiquitin3.
   
 0.916
B4FA90_MAIZE
Ubiquitin-like superfamily protein.
   
 0.916
B6SKC9_MAIZE
Phosphatidylinositol 3-and 4-kinase family protein; Belongs to the PI3/PI4-kinase family.
   
 0.916
B6TU98_MAIZE
Ubiquitin family protein.
   
 0.916
C0HE51_MAIZE
Uncharacterized protein.
   
 0.916
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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