STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6LKB5E3 ubiquitin-protein ligase XBAT33. (409 aa)    
Predicted Functional Partners:
A0A1D6GBB7
SGS domain-containing protein.
    
 
 0.661
Pco119359
SGS domain-containing protein.
    
 
 0.661
B4F8Z4_MAIZE
Putative E3 ubiquitin-protein ligase XBAT35.
  
 
 0.568
A0A1D6KIC4
Ankyrin repeat family protein.
  
 
  0.545
A0A1D6IRP7
Ankyrin repeat family protein.
  
 
  0.544
Pco138649
Ankyrin repeat domain-containing protein EMB506 chloroplastic.
  
 
  0.544
B6THC5_MAIZE
Ankyrin repeat protein.
  
 
  0.544
B6TNC0_MAIZE
Ankyrin repeat domain-containing protein 2A.
  
 
  0.543
Pco076711
Ankyrin repeat domain-containing protein 2A.
  
 
  0.542
B4FRA5_MAIZE
Ankyrin repeat family protein.
  
 
  0.528
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.