A0A1D6LPW4 protein (Zea mays) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1D6LPW4

Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (227 aa)

Predicted Functional Partners:

A0A1D6JI52

0.951

Pco073966

0.762

A0A1D6QQ13

0.762

A0A1D6J8K2

0.757

A0A1D6KSE9

0.757

B4FBP0_MAIZE

0.757

A0A1D6EVD9

0.728

A0A1D6HDR8

0.728

A0A1D6GSL8

0.684

B4FEE3_MAIZE

0.684

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6EVD9	A0A1D6LPW4	A0A1D6EVD9	A0A1D6LPW4	Myosin-10.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.728
A0A1D6GSL8	A0A1D6LPW4	A0A1D6GSL8	A0A1D6LPW4	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.684
A0A1D6GSL8	B4FEE3_MAIZE	A0A1D6GSL8	B4FEE3	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.900
A0A1D6HDR8	A0A1D6LPW4	A0A1D6HDR8	A0A1D6LPW4	Myosin-10.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.728
A0A1D6J8K2	A0A1D6KSE9	A0A1D6J8K2	A0A1D6KSE9	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.544
A0A1D6J8K2	A0A1D6LPW4	A0A1D6J8K2	A0A1D6LPW4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.757
A0A1D6J8K2	A0A1D6QQ13	A0A1D6J8K2	A0A1D6QQ13	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.997
A0A1D6J8K2	B4FBP0_MAIZE	A0A1D6J8K2	B4FBP0	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.545
A0A1D6J8K2	Pco073966	A0A1D6J8K2	A0A1D6JSN1	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.997
A0A1D6JI52	A0A1D6LPW4	A0A1D6JI52	A0A1D6LPW4	Tubulin beta-7 chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.951
A0A1D6KSE9	A0A1D6J8K2	A0A1D6KSE9	A0A1D6J8K2	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.544
A0A1D6KSE9	A0A1D6LPW4	A0A1D6KSE9	A0A1D6LPW4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.757
A0A1D6KSE9	A0A1D6QQ13	A0A1D6KSE9	A0A1D6QQ13	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.997
A0A1D6KSE9	B4FBP0_MAIZE	A0A1D6KSE9	B4FBP0	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.544
A0A1D6KSE9	Pco073966	A0A1D6KSE9	A0A1D6JSN1	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.992
A0A1D6LPW4	A0A1D6EVD9	A0A1D6LPW4	A0A1D6EVD9	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Myosin-10.	0.728
A0A1D6LPW4	A0A1D6GSL8	A0A1D6LPW4	A0A1D6GSL8	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.684
A0A1D6LPW4	A0A1D6HDR8	A0A1D6LPW4	A0A1D6HDR8	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Myosin-10.	0.728
A0A1D6LPW4	A0A1D6J8K2	A0A1D6LPW4	A0A1D6J8K2	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.757
A0A1D6LPW4	A0A1D6JI52	A0A1D6LPW4	A0A1D6JI52	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin beta-7 chain.	0.951

page 1 of 3

Server load: low (26%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2024

Credits

Access

Info

About