STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6LRQ8Pectin lyase-like superfamily protein. (414 aa)    
Predicted Functional Partners:
BG266188
Galactokinase.
     
  0.800
A0A1D6KB09
ATP binding protein.
     
  0.800
A0A1D6QT52
L-arabinokinase.
     
  0.800
K7VKI0_MAIZE
Polygalacturonase.
  
  
 
0.689
A0A1D6L8S3
Polygalacturonase QRT2.
  
  
 
0.682
B4FUB7_MAIZE
Exopolygalacturonase clone GBGE184.
  
  
 
0.682
B4FZT4_MAIZE
Polygalacturonase QRT2.
  
  
 
0.682
A0A1D6L8J1
Polygalacturonase QRT2.
  
  
 
0.681
A0A1D6L8J2
Polygalacturonase QRT2.
  
  
 
0.681
A0A1D6JFG2
Beta-D-xylosidase 4.
     
  0.600
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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