STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pco078628Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (335 aa)    
Predicted Functional Partners:
A0A1D6Q0W5
RNA-binding (RRM/RBD/RNP motifs) family protein.
   
 
 0.985
Pco095316b
Brix domain-containing protein 1.
   
 
 0.978
B6TD11_MAIZE
Ribosome production factor 2-like protein.
   
 
 0.978
C0P4M1_MAIZE
Putative rRNA-processing protein EBP2-like protein.
   
 0.977
C4JC78_MAIZE
Putative rRNA-processing protein EBP2-like protein.
   
 0.977
A0A1D6IKY1
Putative ribosome biogenesis protein RLP24.
   
 
 0.973
B4FKM9_MAIZE
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 0.972
B4FQZ4_MAIZE
Uncharacterized protein.
   
 0.967
A0A1D6E7G9
Ribosomal protein L10 family protein.
   
 0.961
A0A1D6EJ69
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 0.961
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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