Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A1D6MN28G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5. (668 aa)    
Predicted Functional Partners:
B6TQP7_MAIZE
Lipid transfer protein.
      
 0.631
A0A1D6GGE5
Pyridoxal phosphate (PLP)-dependent transferase superfamily protein.
      
 0.563
A0A1D6K6V9
Methyltransferase.
      
 0.563
C0HGW1_MAIZE
Uncharacterized protein.
      
 0.563
C0PEE9_MAIZE
Pyridoxal phosphate (PLP)-dependent transferase superfamily protein.
      
 0.563
A0A1D6I8A0
ALBINO3-like protein 1 chloroplastic.
    
 
 0.510
Cl5360_1
Gene trap locus 3.
    
 
 0.510
A0A1D6ICH8
WRKY domain-containing protein.
      
 0.504
B6SMI9_MAIZE
WRKY55-superfamily of TFs having WRKY and zinc finger domains.
      
 0.504
Hsp101
Chaperone protein ClpB1; Belongs to the ClpA/ClpB family.
      
 0.504
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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