STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6MWR3RNase H domain-containing protein. (221 aa)    
Predicted Functional Partners:
A0A1D6KTT8
60S ribosomal protein L21-1.
   
   0.514
Pco098394
60S ribosomal protein L21-1.
   
   0.514
Pco098402
60S ribosomal protein L21-1.
   
   0.514
C4J5F8_MAIZE
60S ribosomal protein L21-1.
   
   0.514
A0A1D6QC37
60S ribosomal protein L39.
   
   0.464
RPL39
60S ribosomal protein L39; Belongs to the eukaryotic ribosomal protein eL39 family.
   
   0.464
A0A1D6L548
60S ribosomal protein L13a-1.
   
   0.438
C0HFM4_MAIZE
60S ribosomal protein L13a-1.
   
   0.438
A0A3B6UA81
Ribosomal_L2_C domain-containing protein.
   
 
 0.436
rpl2-A
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
   
 
 0.436
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.