STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6N1J1Crossover junction endonuclease MUS81. (588 aa)    
Predicted Functional Partners:
B4FBX5_MAIZE
DNA excision repair protein ERCC-1.
   
 0.978
A0A1D6FF61
Putative DUF1767 domain containing protein.
    
 0.966
B6UB08_MAIZE
Uncharacterized protein.
  
 0.962
A0A1D6QTE4
DNA repair endonuclease UVH1.
    
 0.961
A0A1D6JRU7
DNA repair protein UVH3.
   
 0.943
IDP264
Exonuclease 1.
   
 0.932
A0A1D6HJA2
Zinc ion binding.
    
 0.931
B4FCH1_MAIZE
Zinc ion binding.
    
 0.931
A0A1D6JPQ3
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.906
A0A1D6N1J5
Crossover junction endonuclease MUS81.
  
  
 
0.904
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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