STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6N841P-loop containing nucleoside triphosphate hydrolase superfamily protein. (161 aa)    
Predicted Functional Partners:
A0A1D6KWQ3
Uncharacterized protein.
   
 0.995
A0A1D6MZH7
Uncharacterized protein.
   
 0.995
B4FFH2_MAIZE
U3 small nucleolar RNA-associated protein 18-like protein.
   
 0.995
A0A1D6JNW9
Transducin family protein / WD-40 repeat family protein.
   
 0.994
A0A1D6MAI6
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 0.994
A0A1D6FL68
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
  
 
 0.993
A0A1D6KG30
Transducin/WD40 repeat-like superfamily protein.
   
 0.993
Gpm697
ARM repeat superfamily protein.
   
 0.993
A0A1D6ML08
ARM repeat superfamily protein.
   
 0.993
A0A1D6MAS1
Periodic tryptophan protein 2.
   
 0.991
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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