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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6NEL8NPK1-related protein kinase-like protein; Belongs to the protein kinase superfamily. (475 aa)    
Predicted Functional Partners:
MADS42
Agamous-like MADS-box protein AGL62.
    
 0.685
B4G0F5_MAIZE
Ent-cassadiene C2-hydroxylase; Belongs to the cytochrome P450 family.
    
 
 0.671
A0A1D6LEA7
Putative NAC domain transcription factor superfamily protein.
      
 0.661
A0A1D6LKH4
Putative NAC domain transcription factor superfamily protein.
      
 0.661
A0A1D6NQ63
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.661
A0A1D6NW32
NAC domain-containing protein 43.
      
 0.661
NAC115
Secondary wall NAC transcription factor 2.
      
 0.661
A0A1D6MI10
Putative WRKY transcription factor 36.
      
 0.660
A0A1D6NVJ5
Putative WRKY DNA-binding domain superfamily protein.
      
 0.660
A0A1D6PID5
Sulfate transporter 1.2.
      
 0.660
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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