STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6NU49Dehydrodolichyl diphosphate synthase 6. (454 aa)    
Predicted Functional Partners:
A0A1D6JSF0
Undecaprenyl pyrophosphate synthetase family protein.
   
 0.936
B4FHK0_MAIZE
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.936
TPS1
Acyclic sesquiterpene synthase; Involved in the formation of (E)-beta-farnesene and (3E)-4,8- dimethyl-1,3,7-nonatriene, key signal molecules in induced plant defense mediated by the attraction of enemies of herbivores. In the presence of geranyl diphosphate, catalyzes the formation of the acyclic monoterpens (3R)-linalool and geraniol. However, the in vitro rate of sesquiterpene formation is about four times higher than the rate of monoterpene formation. Mediates the conversion of ent-copalyl diphosphate into ent-kaurene, thus having probably a role in gibberellin biosynthesis.
     
 0.902
K7U2X9_MAIZE
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit chloroplastic; Belongs to the FPP/GGPP synthase family.
 
 
 0.846
D3G6F2_MAIZE
Putative geranylgeranyl pyrophosphate synthase 4; Belongs to the FPP/GGPP synthase family.
 
 
 0.842
C5G5X5_MAIZE
Putative geranylgeranyl pyrophosphate synthase 3; Belongs to the FPP/GGPP synthase family.
 
 
 0.835
A0A1D6L8A5
Squalene synthase 1.
     
 0.824
PSY3
Phytoene synthase 3, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis. May play a role in regulating carotenoid flux in response to abiotic stress in roots. May control flux to carotenoid precursors that are required for abiotic stress-induced abscisic acid (ABA) formation in roots.
     
 0.824
Sqs1
Squalene synthase1.
     
 0.824
PSY1
Phytoene synthase 1, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis. Belongs to the phytoene/squalene synthase family.
     
 0.824
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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