STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vacs1Vacuolar-sorting receptor 1. (654 aa)    
Predicted Functional Partners:
A0A1D6IL85
DNAse I-like superfamily protein.
    
 0.705
A0A1D6J5U2
Farnesylated protein 3.
      
 0.664
C0HF39_MAIZE
Farnesylated protein 3.
      
 0.664
C0PIA6_MAIZE
Farnesylated protein 3.
      
 0.664
A0A1D6GRY0
Vacuolar-sorting receptor 4.
  
  
 
0.549
C0P5C9_MAIZE
Vacuolar sorting receptor 7.
  
  
 
0.549
AY109995
Vacuolar-sorting receptor 4.
  
  
 
0.547
A0A1D6EJ13
Vacuolar-sorting receptor 1.
  
  
 
0.545
C0PCZ4_MAIZE
Vacuolar-sorting receptor 1.
  
  
 
0.545
K7U6F0_MAIZE
Vacuolar-sorting receptor 1.
  
  
 
0.545
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.