STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6PDR3Retrovirus-related Pol polyprotein LINE-1. (651 aa)    
Predicted Functional Partners:
A0A1D6HAV7
Ankyrin repeat protein SKIP35.
  
     0.456
A0A1D6GXK2
Uncharacterized protein.
  
     0.444
A0A1D6I1K1
Uncharacterized protein.
  
     0.433
A0A1D6PR72
Fidgetin-like protein 1.
  
     0.428
A0A1D6H4N1
Endo/exonuclease/phosphatase domain-containing protein.
  
     0.426
A0A1D6J7V5
Cysteine-rich receptor-like protein kinase 26.
  
     0.418
A0A1D6L8S4
Ubiquitin-60S ribosomal protein L40.
    
 0.409
B6SHW9_MAIZE
Ubiquitin-60S ribosomal protein L40-1.
    
 0.409
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.