STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6PIH6RING/U-box superfamily protein. (597 aa)    
Predicted Functional Partners:
A0A1D6EIE2
E3 ubiquitin-protein ligase listerin.
    
 
 0.611
IDP701
Eukaryotic translation initiation factor NCBP; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.550
A0A1D6JRW6
Ubiquitin system component Cue protein.
    
 
 0.512
A0A1D6ET20
Uncharacterized protein.
      
 0.499
Cl36156_1
Zinc finger motif, C2HC5-type family protein.
    
 
 0.491
A0A1D6H1M4
S-adenosyl-L-methionine-dependent methyltransferase superfamily protein.
    
 
 0.480
B4FKM1_MAIZE
Guanine nucleotide-binding protein beta subunit-like protein.
    
 
 0.480
Gpm583
Guanine nucleotide-binding protein beta subunit-like protein.
    
 
 0.480
A0A1D6DVD9
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
    
 
 0.469
A0A1D6N0T6
SART-1 family protein DOT2.
   
    0.467
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.