STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6QEM0Sphinganine C4-monooxygenase 1; Belongs to the sterol desaturase family. (258 aa)    
Predicted Functional Partners:
A0A1D6EY64
Sphingosine kinase 1.
   
 0.930
A0A1D6E4U5
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
   
 
 0.906
Cl24314_1
Neutral ceramidase.
     
  0.900
B4FEQ6_MAIZE
3-dehydrosphinganine reductase TSC10B.
     
 0.748
K7U3E5_MAIZE
3-dehydrosphinganine reductase TSC10B.
     
 0.748
B4FSP4_MAIZE
Alkaline phytoceramidase (APHC).
     
 0.715
C0PIH5_MAIZE
Alkaline phytoceramidase (APHC).
     
 0.715
A0A1D6F1V6
Delta(14)-sterol reductase.
   
 0.661
Pco110886
7-dehydrocholesterol reductase.
   
 0.661
A0A1D6KGQ2
Dihydroceramide fatty acyl 2-hydroxylase FAH1; Belongs to the sterol desaturase family.
   
 
 0.585
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.