STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D6QK11Phospho-2-dehydro-3-deoxyheptonate aldolase. (506 aa)    
Predicted Functional Partners:
A0A1D6IPW7
3-dehydroquinate synthase chloroplastic.
  
 0.951
B4FS26_MAIZE
3-dehydroquinate synthase chloroplastic.
  
 0.951
A0A1D6MXQ7
Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase chloroplastic.
  
 0.810
Cl40355_1
Shikimate biosynthesis protein aroDE.
  
 0.810
A0A1D6EEB5
Transketolase-1 chloroplastic.
   
 0.806
A0A1D6NVZ7
Transketolase 1.
   
 0.806
A0A1D6NVZ6
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.745
A0A1D6HKK5
Shikimate kinase.
     
 0.679
B4FPS0_MAIZE
Shikimate kinase 1 chloroplastic.
     
 0.679
Umc2169
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase.
     
 0.661
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.