A0A1X7YEZ5 protein (Zea mays) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1X7YEZ5

Uncharacterized protein. (445 aa)

Predicted Functional Partners:

A0A1D6FL68

0.969

A0A1D6KWQ3

0.966

Pco061701

0.964

A0A1D6JNW9

0.958

A0A1D6MZH7

0.948

B4FFH2_MAIZE

0.946

Pco083390

0.944

A0A1D6GQK2

0.937

A0A1D6K2M2

0.937

A0A1D6LY00

0.937

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6FL68	A0A1D6GQK2	A0A1D6FL68	A0A1D6GQK2	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 ribonucleoprotein (Utp) family protein.	0.981
A0A1D6FL68	A0A1D6JNW9	A0A1D6FL68	A0A1D6JNW9	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Transducin family protein / WD-40 repeat family protein.	0.999
A0A1D6FL68	A0A1D6K2M2	A0A1D6FL68	A0A1D6K2M2	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 ribonucleoprotein (Utp) family protein.	0.981
A0A1D6FL68	A0A1D6KWQ3	A0A1D6FL68	A0A1D6KWQ3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.999
A0A1D6FL68	A0A1D6LY00	A0A1D6FL68	A0A1D6LY00	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 ribonucleoprotein (Utp) family protein.	0.981
A0A1D6FL68	A0A1D6MZH7	A0A1D6FL68	A0A1D6MZH7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.999
A0A1D6FL68	A0A1X7YEZ5	A0A1D6FL68	A0A1X7YEZ5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.969
A0A1D6FL68	B4FFH2_MAIZE	A0A1D6FL68	B4FFH2	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 small nucleolar RNA-associated protein 18-like protein.	0.989
A0A1D6FL68	Pco061701	A0A1D6FL68	A0A1D6DT18	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.998
A0A1D6FL68	Pco083390	A0A1D6FL68	B4FJ57	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosomal RNA processing Brix domain protein.	0.993
A0A1D6GQK2	A0A1D6FL68	A0A1D6GQK2	A0A1D6FL68	U3 ribonucleoprotein (Utp) family protein.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.981
A0A1D6GQK2	A0A1D6JNW9	A0A1D6GQK2	A0A1D6JNW9	U3 ribonucleoprotein (Utp) family protein.	Transducin family protein / WD-40 repeat family protein.	0.991
A0A1D6GQK2	A0A1D6K2M2	A0A1D6GQK2	A0A1D6K2M2	U3 ribonucleoprotein (Utp) family protein.	U3 ribonucleoprotein (Utp) family protein.	0.540
A0A1D6GQK2	A0A1D6KWQ3	A0A1D6GQK2	A0A1D6KWQ3	U3 ribonucleoprotein (Utp) family protein.	Uncharacterized protein.	0.998
A0A1D6GQK2	A0A1D6LY00	A0A1D6GQK2	A0A1D6LY00	U3 ribonucleoprotein (Utp) family protein.	U3 ribonucleoprotein (Utp) family protein.	0.540
A0A1D6GQK2	A0A1D6MZH7	A0A1D6GQK2	A0A1D6MZH7	U3 ribonucleoprotein (Utp) family protein.	Uncharacterized protein.	0.994
A0A1D6GQK2	A0A1X7YEZ5	A0A1D6GQK2	A0A1X7YEZ5	U3 ribonucleoprotein (Utp) family protein.	Uncharacterized protein.	0.937
A0A1D6GQK2	B4FFH2_MAIZE	A0A1D6GQK2	B4FFH2	U3 ribonucleoprotein (Utp) family protein.	U3 small nucleolar RNA-associated protein 18-like protein.	0.997
A0A1D6GQK2	Pco061701	A0A1D6GQK2	A0A1D6DT18	U3 ribonucleoprotein (Utp) family protein.	Uncharacterized protein.	0.984
A0A1D6GQK2	Pco083390	A0A1D6GQK2	B4FJ57	U3 ribonucleoprotein (Utp) family protein.	Ribosomal RNA processing Brix domain protein.	0.982