STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7YIJ1Photosystem II reaction center Psb28 protein; Belongs to the Psb28 family. (242 aa)    
Predicted Functional Partners:
A0A1D6HY75
Photosystem I reaction center subunit IV A.
  
  
 0.799
B6TH55_MAIZE
Photosystem I reaction center subunit IV A.
  
  
 0.780
Umc1974
Photosystem I reaction center subunit XI chloroplastic.
  
  
 0.776
A0A1D6MER1
Zinc finger protein MAGPIE.
      
 0.750
Pco139896
Photosystem I subunit O.
      
 0.722
B6SQV2_MAIZE
Photosystem II core complex proteins psbY.
   
  
 0.709
B6STG2_MAIZE
Photosystem I reaction center subunit XI chloroplastic.
  
  
 0.709
K7UBV2_MAIZE
Photosystem II core complex protein psbY.
   
  
 0.709
Pco148683
50S ribosomal protein L4.
      
 0.668
C0HIK6_MAIZE
Zinc transporter 4.
      
 0.665
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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