STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Umc1433Zinc finger (C3HC4-type RING finger) family protein. (526 aa)    
Predicted Functional Partners:
K7TMN0_MAIZE
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
  
 0.936
A0A1D6DTL6
Magnesium-chelatase subunit ChlH chloroplastic.
  
 0.758
A0A1D6JHX0
Magnesium-chelatase subunit ChlH chloroplastic.
  
 0.758
Prpo2
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.614
Prpo1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.614
A0A1D6MR94
Protoporphyrinogen oxidase 1 chloroplastic.
   
 
 0.614
A0A1D6E936
OSJNBa0072F16.18-like protein.
     
 0.597
B4FV63_MAIZE
Nuclear transport factor 2 (NTF2) family protein.
     
 0.597
Umc2770
GMP synthase [glutamine-hydrolyzing].
    
  0.594
A0A1D6FP61
Ubiquinone biosynthesis O-methyltransferase mitochondrial.
   
 0.482
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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