STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4FHV3_MAIZESigma factor sigB regulation protein rsbQ. (271 aa)    
Predicted Functional Partners:
A0A1D6NWT6
Putative acyl-activating enzyme 19.
    
 0.542
A0A1D6GW46
F-box/kelch-repeat protein SKIP25.
      
 0.512
CCD8
Carotenoid cleavage dioxygenase8.
      
 0.505
CCD7
Carotenoid cleavage dioxygenase7.
      
 0.503
Pco137163(463)
Isochorismatase family protein rutB.
  
 0.497
A0A1D6LL92
F-box protein MAX2.
    
 
 0.496
K7V6U2_MAIZE
F-box protein MAX2.
    
 
 0.496
A0A1D6M065
Serine/threonine-protein phosphatase 5.
    
 
 0.453
Pco079304
2-oxoisovalerate dehydrogenase subunit alpha 2 mitochondrial.
  
 
 0.438
Umc1491
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.430
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.