STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pco104496Putative ubiquitin-conjugating enzyme E2 25. (373 aa)    
Predicted Functional Partners:
A0A1D6FS31
E3 ubiquitin-protein ligase UPL4.
   
 0.762
A0A1D6LGG4
E3 ubiquitin-protein ligase UPL4.
   
 0.762
A0A1D6LGX2
E3 ubiquitin-protein ligase UPL4.
   
 0.762
A0A1D6MLE3
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.760
A0A1D6L8S4
Ubiquitin-60S ribosomal protein L40.
   
 0.759
B6SHW9_MAIZE
Ubiquitin-60S ribosomal protein L40-1.
   
 0.759
A0A096QLF3
E3 ubiquitin-protein ligase UPL3.
   
 0.758
A0A1D6GXR8
Putative hect E3 ubiquitin ligase.
   
 0.758
B6TKR6_MAIZE
Anaphase-promoting complex subunit 11.
    
 0.750
A0A1D6FR70
E3 ubiquitin-protein ligase KEG.
    
 0.724
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.