STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4FIB4_MAIZEHistone deacetylase complex subunit SAP18. (152 aa)    
Predicted Functional Partners:
A0A1D6IKA7
SAP domain-containing protein.
   
 0.994
A0A1D6K4K6
SAP domain-containing protein.
   
 0.994
K7VKP3_MAIZE
Putative SAP DNA-binding domain family protein isoform 1.
   
 0.994
A0A1D6L113
Pinin/SDK/memA/ protein conserved region containing protein.
    
 0.986
A0A1D6EKY6
THO complex subunit 4B.
   
 
 0.965
Cl8663_2a
THO complex subunit 4B.
   
 
 0.965
B4FWP1_MAIZE
THO complex subunit 4C.
   
 
 0.965
B6T346_MAIZE
THO complex subunit 4B.
   
 
 0.965
B8A280_MAIZE
THO complex subunit 4C.
   
 
 0.965
SR45_1
Arginine/serine-rich splicing factor SR45_1.
    
 0.931
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.