STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4FID1_MAIZE40S ribosomal protein S17-1. (142 aa)    
Predicted Functional Partners:
A0A1D6JMR7
60S ribosomal protein L5-1.
   
 
 0.998
B4F9R4_MAIZE
60S ribosomal protein L8-3.
   
 
 0.996
A0A1D6E6T5
40S ribosomal protein S11-1; Belongs to the universal ribosomal protein uS17 family.
   
 0.995
A0A1D6F918
40S ribosomal protein S15-4; Belongs to the universal ribosomal protein uS19 family.
   
 0.995
A0A1D6L8S4
Ubiquitin-60S ribosomal protein L40.
   
 0.995
B4FD90_MAIZE
40S ribosomal protein S19-3.
  
 0.995
B4FP25_MAIZE
40S ribosomal protein S19-3.
  
 0.995
B6SHW9_MAIZE
Ubiquitin-60S ribosomal protein L40-1.
   
 0.995
B6UDY1_MAIZE
40S ribosomal protein S15-4; Belongs to the universal ribosomal protein uS19 family.
   
 0.995
RPS11
40S ribosomal protein S11.
   
 0.995
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.