STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4FJ64_MAIZERING-H2 finger protein ATL3. (182 aa)    
Predicted Functional Partners:
A0A1D6EHB8
Putative BOI-related E3 ubiquitin-protein ligase 2.
      
 0.777
A0A1D6I6V9
E3 ubiquitin-protein ligase UPL5.
    
 0.768
C4J431_MAIZE
E3 ubiquitin-protein ligase UPL5.
    
 0.768
A0A1D6N853
Cysteine protease 1; Belongs to the peptidase C1 family.
      
 0.665
A0A1D6PTB9
Senescence-specific cysteine protease SAG12; Belongs to the peptidase C1 family.
      
 0.664
A0A1D6GGX8
Cysteine protease 1; Belongs to the peptidase C1 family.
      
 0.662
A0A1D6JG12
Cysteine protease 1; Belongs to the peptidase C1 family.
      
 0.662
B4FS90_MAIZE
Putative cysteine protease RD21B; Belongs to the peptidase C1 family.
      
 0.662
A0A1D6ERW1
RING-H2 finger protein.
  
   
 0.649
A0A1D6KW24
SPX domain-containing protein 3.
      
 0.551
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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