STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4FM78_MAIZEE3 ubiquitin-protein ligase ATL6. (362 aa)    
Predicted Functional Partners:
Pco143001(71)
Zinc finger, C3HC4 type family protein.
  
  
  0.668
K7VXV8_MAIZE
Putative RING zinc finger domain superfamily protein.
  
  
 
0.622
A0A1D6K8V1
E3 ubiquitin-protein ligase ATL4.
  
  
 
0.620
C0PJ80_MAIZE
E3 ubiquitin-protein ligase ATL6.
  
  
 
0.612
A0A1D6K7Z3
RING-H2 finger protein ATL57.
  
  
 
0.606
A0A1D6E9I1
E3 ubiquitin-protein ligase ATL6.
  
  
 
0.604
A0A1D6QE43
Putative RING zinc finger domain superfamily protein.
  
  
 
0.600
A0A1D6K4X2
E3 ubiquitin-protein ligase ATL6.
  
  
 
0.599
B6SJG4_MAIZE
Putative RING zinc finger domain superfamily protein.
  
  
 
0.599
Gpm915
RING/U-box superfamily protein.
  
  
 
0.594
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.