STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pco078765Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (199 aa)    
Predicted Functional Partners:
B4FAK8_MAIZE
Calnexin homolog2.
    
 
 0.567
B6TNF1_MAIZE
Calnexin homolog1.
    
 
 0.567
Cl335_1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.486
B4FE73_MAIZE
Transmembrane emp24 domain-containing protein p24beta2.
   
 
 0.426
Pco090181a
Transmembrane emp24 domain-containing protein p24beta3.
   
 
 0.426
B4FV79_MAIZE
Transmembrane emp24 domain-containing protein p24beta3.
   
 
 0.426
Pco090197
Transmembrane emp24 domain-containing protein p24beta2.
   
 
 0.426
B6TUK7_MAIZE
Putative gamma-secretase subunit PEN-2.
   
  
 0.420
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.